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Table 2 Main satellite families with long repeat lengths

From: Satellites in the prokaryote world

Archaea

Bacteria

Family

Genus or species

Family

Genus or species

Fam_1_126_16

Methanosarcina

Fam_13_96_8

Several species

Fam_15_246_6

Methanosarcina barkeri

Fam_14_39_8

Several species

Fam_16_141_6

Methanosarcina

Fam_17_100_7

Escherichia coli

Fam_17_78_6

Methanobrevibacter olleyae

Fam_23_69_6

Flavobacterium psychrophilum

Fam_23_156_5

Methanothrix soehngenii

Fam_24_46_6

Leptospira interrogans

Fam_24_141_5

Methanosphaerula palustris

Fam_25_46_6

Leptospira interrogans

Fam_25_120_5

Methanosarcina

Fam_26_37_6

Leptospira interrogans

Fam_26_108_5

Methanosarcina

Fam_31_69_5

Leptospira interrogans

Fam_27_37_5

Methanocella conradii

Fam_32_45_5

Streptococcus

Fam_44_255_4

Methanosarcina

Fam_33_30_5

Mycobacterium

Fam_45_123_4

Methanosarcina

Fam_42_93_4

Escherichia coli

Fam_46_102_4

Methanothermobacter

Fam_43_39_4

Bacillus

Fam_47_69_4

Methanosarcina

Fam_44_36_4

Bacillus

Fam_48_45_4

Methanoculleus marisnigri

Fam_45_36_4

Bacillus

Fam_95_258_3

Methanosarcina

Fam_46_36_4

Bacillus

Fam_96_138_3

Methanosarcina

Fam_47_33_4

Chloroflexus aurantiacus

Fam_97_126_3

Methanosarcina

Fam_56_150_3

Pseudomonas syringae

Fam_98_120_3

Methanosarcina

Fam_57_156_3

Dictyoglomus turgidum

Fam_99_120_3

Methanosarcina

Fam_58_114_3

Pseudomonas syringae

Fam100_102_3

Methanosarcina

Fam_59_108_3

Pseudomonas syringae

Fam_101_93_3

Methanosarcina vacuolata

Fam_60_60_3

Streptococcus

Fam_102_51_3

Methanoculleus marisnigri

Fam_61_56_3

Mycobacterium

Fam_103_42_3

Methanospirillum hungatei

Fam_62_46_3

Leptospira interrogans

  

Fam_63_48_3

Several species

  

Fam_64_45_3

Bacillus

 

Fam_65_42_3

Bacillus

Fam_66_39_3

Bacillus

Fam_67_39_3

Bacillus

Fam_68_36_3

Bacillus

  1. Satellite families are designed by a code of three numbers. The first number in the code indicates the order of this family, as measured by the number of satellites in the family. The second number corresponds to the repeat length of the family. The third number indicates the number of satellites included in the family. When the family belongs to a single species, its name is indicated. Note that most families have a repeat which is a multiple of 3 nt, with the notable exceptions of L. interrogans and M. conradii. In this list are only included those families with at least 3 satellites and a repeat length over 30 nt. A complete list of all families is given in Additional file 7