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Table 6 Positively selected residues detected in Ilex (in both the Worldwide and Chinese datasets) also described in other lineages and associated with biological and environment traits

From: Exceptionally high rates of positive selection on the rbcL gene in the genus Ilex (Aquifoliaceae)

Residues Ilex a Literatureb Biological and environmental traits Authors
86* Q to E,G H,D to E,G Rubisco kinetics [16]
Q to E,G H to Y Wet to dry environment [28]
95* N to S N,T to D,S Leaf traits and climate characteristics [24]
N to S N.A. Rubisco kinetics [16]
142* P to T P to I,T,V Specificity O2/CO2 [16]
P to T P to T C3 to C4 plants [50]
P to T P to A,T C4 to C4 plants [50]
P to T N.A. C3 to C4 plants [7]
219* L to V N.A. Leaf traits and climate characteristics [24]
225* L to I I to L Potamogeton submerged, floating and terrestrial leaves [26]
230 A to T A to T Wet to dry environment [28]
281* A to S S to A Potamogeton submerged, floating and terrestrial leaves [26]
A to S A to S Rubisco kinetics [16]
309* M to I M to I C3 to C4 plants [27]
M to I M to I Specificity O2/CO2 [15]
M to I M to I C3 to C4 plants [50]
M to I M to I C4 to C4 plants [50]
M to I N.A. C3 to C4 plants [7]
320 M to L M to L Rubisco kinetics [16]
328* A to S,G A to S Rubisco kinetics [16]
A to S,G A to S C3 to C4 plants [50]
A to S,G A to S C4 to C4 plants [50]
A to S,G N.A. C3 to C4 plants [7]
A to S,G N.A. Leaf traits and climate characteristics [24]
  1. *Ilex positively selected residues belonging to the 20-most often selected residues of Kapralov and Filatov [29]
  2. aAmino acid substitution in Ilex
  3. bAmino acid substitution in other lineages recorded in the literature