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Table 5 Initial settings for operations on the root

From: Improving the performance of Bayesian phylogenetic inference under relaxed clock models

Strategy Genetic distances t D t E Initial rates
  d j d k d x d i    r j r k r x r i
Simple Distance 0.1 0.2 0.4 0.27 1 10 0.1 0.2 0.04 0.03
Small Pulley 0.1 0.2 0.67 1 10 0.1 0.2 0.04 0.03
Big Pulley 0.5 0.5 0.5 5 10 0.1 0.1 0.03 0.04