Fig. 3
From: Distinct evolutionary trajectories of V1R clades across mouse species
Patterns of orthology and gene duplication across V1R clades. a Phylogeny of all 11 V1R clades. Scale bar indicates 0.7 amino acid substitution per site. Shown to the right of each clade: V1R gene losses in the house mouse (red), and orthogroups with multiple reference annotations (combination-IDs, black). b Percent of V1Rs by clade that fall into each orthology category: reference only, non-orthologous, low orthology and high orthology. c Percent of total (sequenced) transcripts in each clade composed of gene duplicates (reference not included). The size and color of each circle corresponds to the calculated percentage. d Total number of V1R gene duplicates detected in each clade for each species