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Table 1 VNO transcriptome assembly statistics, V1R transcript recovery and genome annotations

From: Distinct evolutionary trajectories of V1R clades across mouse species

Species

Total Transcripts

Mean Length (bp)

N50

% with ORFf

Total V1R Transcripts

V1Rs With Unique Annotations

V1R Genes Detected (With Duplicates)

Genome Annotated V1Rs

M. m. domesticusa

–

–

–

–

263

–

208

208

M. spicilegusb

228,809

664

1632

43

122

105

119

120

M. macedonicus

255,395

649

1630

42

129

117

126

–

M. spretusc

1,181,673

688

1587

31

134 (253)

108 (146)

120 (180)

85

M. carolid

384,865

460

1919

42

131

110

126

50

M. paharie

450,181

305

3107

45

117

93

113

45

  1. The mouse reference genome is shown for comparison (M. m. domesticus, top)a. Recovery estimates combining short and long-read datasets for M. spretus are indicated in bold. aGRCm38.p6, bGenBank accession#: QGOO00000000, cSPRET_EIJ_v1.1, dCAROLI_EIJ_v1.1, ePAHARI_EIJ_v1.1, fORF: open reading frame