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Table 2 Allele frequencies at each Patr locus in the pooled cohort of chimpanzeesa

From: Similar patterns of genetic diversity and linkage disequilibrium in Western chimpanzees (Pan troglodytes verus) and humans indicate highly conserved mechanisms of MHC molecular evolution

Locus DPB1

Locus DQB1

Locus DQA1b

Locus DRB1

Locus B

Locus C

Locus A

N = 44

N = 48

N = 29

N = 46

N = 51

N = 51

N = 50

DPB1*01:09

0.279

DQB1*03:02

0.5937

DQA1*20:04

0.4138

DRB1*02:01

0.2283

B*01:01

0.2807

C*04:01

0.3075

A*03:01

0.1505

DPB1*01:11

0.2514

DQB1*06:02

0.2917

DQA1*01:01

0.2759

DRB1*02:04

0.2283

B*05:01

0.1764

C*06:01

0.2629

A*04:01

0.126

DPB1*01:12

0.1705

DQB1*06:01

0.0521

DQA1*05:02

0.1552

DRB1*03:07

0.1528

B*13:01

0.0784

C*09:01

0.1211

A*09:01

0.126

DPB1*01:07

0.1073

DQB1*15:01

0.0312

DQA1*20:01

0.1034

DRB1*03:02

0.0913

B*24:02

0.0783

C*02:03

0.0686

A*07:01

0.1193

DPB1*01:13

0.1023

DQB1*03:05

0.0208

DQA1*05:03

0.0517

DRB1*03:05

0.087

B*17:01

0.0686

C*11:01

0.049

A*01:01

0.0983

DPB1*01:18

0.0114

DQB1*06:07

0.0104

  

DRB1*03:09

0.0462

B*14:01

0.0588

C*05:01

0.0392

A*14:01

0.07

DPB1*03:04

0.0114

    

DRB1*10:01

0.0435

B*24:01

0.0392

C*12:01

0.033

A*06:01

0.0668

blank

0.0668

    

DRB1*03:11

0.0326

B*04:01

0.0294

C*03:01

0.0196

A*05:01

0.0422

      

DRB1*07:01

0.0217

B*16:01

0.0294

C*05:02

0.0196

A*02:01

0.0319

      

blank

0.0684

B*20:01

0.0294

C*01:01

0.0114

A*11:01

0.03

        

B*03:01

0.0214

C*02:02

0.0098

A*06:02

0.0106

        

B*09:01

0.0214

C*08:01

0.0098

A*03:02

0.01

        

B*29:01

0.0196

C*09:02

0.0098

A*04:02

0.01

        

B*05:02

0.0098

C*13:02

0.0098

A*04:04

0.01

        

B*08:02

0.0098

blank

0.0288

A*08:02

0.01

        

B*10:01

0.0098

  

A*08:03

0.01

        

B*16:02

0.0098

  

A*17:01

0.01

        

B*19:01

0.0098

  

blank

0.0683

        

B*22:01

0.0098

    
        

B*23:01

0.0098

    
        

blank

0.0002

    
  1. Alleles in grey have a frequency lower than 0.05
  2. aThe allele frequencies for the individual chimpanzee cohorts are in Additional Table S1
  3. bFor locus DQA1, only data for cohort BPRCwb are available