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Genome evolution and evolutionary systems biology

Section edited by Maria Anisimova, Arndt von Haeseler and David Liberles

This section considers studies on genome evolution and systems biology approaches to determining evolutionary processes.

Page 2 of 19
  1. Content type: Research article

    Morphological divergences of snake retinal structure point to complex evolutionary processes and adaptations. The Colubridae family has a remarkable variety of retinal structure that can range from all-cone an...

    Authors: E. Hauzman, D. M. O. Bonci, E. Y. Suárez-Villota, M. Neitz and D. F. Ventura

    Citation: BMC Evolutionary Biology 2017 17:249

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  2. Content type: Research article

    Ancient Di-Qiang people once resided in the Ganqing region of China, adjacent to the Central Plain area from where Han Chinese originated. While gene flow between the Di-Qiang and Han Chinese has been proposed...

    Authors: Jiawei Li, Wen Zeng, Ye Zhang, Albert Min-Shan Ko, Chunxiang Li, Hong Zhu, Qiaomei Fu and Hui Zhou

    Citation: BMC Evolutionary Biology 2017 17:239

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  3. Content type: Research article

    The presence of non-coding introns is a characteristic feature of most eukaryotic genes. While the size of the introns, number of introns per gene and the number of intron-containing genes can vary greatly bet...

    Authors: Rajiv K. Parvathaneni, Victoria L. DeLeo, John J. Spiekerman, Debkanta Chakraborty and Katrien M. Devos

    Citation: BMC Evolutionary Biology 2017 17:238

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  4. Content type: Research article

    An important feature of eukaryotic evolution is metabolic compartmentalization, in which certain pathways are restricted to the cytosol or specific organelles. Glycolysis in eukaryotes is described as a cytoso...

    Authors: Melania Abrahamian, Meenakshi Kagda, Audrey M. V. Ah-Fong and Howard S. Judelson

    Citation: BMC Evolutionary Biology 2017 17:241

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  5. Content type: Research article

    The Cas4 family endonuclease is a component of the adaptation module in many variants of CRISPR-Cas adaptive immunity systems. Unlike most of the other Cas proteins, Cas4 is often encoded outside CRISPR-cas loci ...

    Authors: Sanjarbek Hudaiberdiev, Sergey Shmakov, Yuri I. Wolf, Michael P. Terns, Kira S. Makarova and Eugene V. Koonin

    Citation: BMC Evolutionary Biology 2017 17:232

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  6. Content type: Research article

    Siglecs-11 and -16 are members of the sialic acid recognizing Ig-like lectin family, and expressed in same cells. Siglec-11 functions as an inhibitory receptor, whereas Siglec-16 exhibits activating properties...

    Authors: Toshiyuki Hayakawa, Zahra Khedri, Flavio Schwarz, Corinna Landig, Suh-Yuen Liang, Hai Yu, Xi Chen, Naoko T. Fujito, Yoko Satta, Ajit Varki and Takashi Angata

    Citation: BMC Evolutionary Biology 2017 17:228

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  7. Content type: Research article

    Organisms living at high altitudes face low oxygen and temperature conditions; thus, the genetic mechanisms underlying the adaptations in these organisms merit investigation. The glyptosternoid fish, Creteuchilog...

    Authors: Jingliang Kang, Xiuhui Ma and Shunping He

    Citation: BMC Evolutionary Biology 2017 17:229

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  8. Content type: Research article

    Grass powdery mildew (Blumeria graminis, Ascomycota) is a major pathogen of cereal crops and has become a model organism for obligate biotrophic fungal pathogens of plants. The sequenced genomes of two formae spe...

    Authors: Fabrizio Menardo, Coraline R. Praz, Thomas Wicker and Beat Keller

    Citation: BMC Evolutionary Biology 2017 17:223

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  9. Content type: Research article

    Small non-coding RNAs, including miRNAs, and gene silencing mediated by RNA interference have been described in free-living and parasitic lineages of flatworms, but only few key factors of the small RNA pathwa...

    Authors: Santiago Fontenla, Gabriel Rinaldi, Pablo Smircich and Jose F. Tort

    Citation: BMC Evolutionary Biology 2017 17:215

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  10. Content type: Research article

    Filamentous cyanobacteria that differentiate multiple cell types are considered the peak of prokaryotic complexity and their evolution has been studied in the context of multicellularity origins. Species that ...

    Authors: Robin Koch, Anne Kupczok, Karina Stucken, Judith Ilhan, Katrin Hammerschmidt and Tal Dagan

    Citation: BMC Evolutionary Biology 2017 17:209

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  11. Content type: Research article

    Cetacean brain size expansion is an enigmatic event in mammalian evolution, yet its genetic basis remains poorly explored. Here, all exons of the seven primary microcephaly (MCPH) genes that play key roles in siz...

    Authors: Shixia Xu, Xiaohui Sun, Xu Niu, Zepeng Zhang, Ran Tian, Wenhua Ren, Kaiya Zhou and Guang Yang

    Citation: BMC Evolutionary Biology 2017 17:206

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  12. Content type: Research article

    The molecular basis of evolutionary change is assumed to be genetic variation. However, growing evidence suggests that epigenetic mechanisms, such as DNA methylation, may also be involved in rapid adaptation t...

    Authors: Sabrina M. McNew, Daniel Beck, Ingrid Sadler-Riggleman, Sarah A. Knutie, Jennifer A. H. Koop, Dale H. Clayton and Michael K. Skinner

    Citation: BMC Evolutionary Biology 2017 17:183

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  13. Content type: Research article

    Numerous biological functions of long intergenic non-coding RNAs (lincRNAs) have been identified. However, the contribution of lincRNAs to the domestication process has remained elusive. Following domesticatio...

    Authors: Yun-Mei Wang, Hai-Bo Xu, Ming-Shan Wang, Newton Otieno Otecko, Ling-Qun Ye, Dong-Dong Wu and Ya-Ping Zhang

    Citation: BMC Evolutionary Biology 2017 17:192

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  14. Content type: Research article

    Pollen tube growth and fertilization are key processes in angiosperm sexual reproduction. The transmitting tract (TT) of Nicotiana tabacum controls pollen tube growth in part by secreting pistil extensin-like pro...

    Authors: Andrzej K. Noyszewski, Yi-Cheng Liu, Koichiro Tamura and Alan G. Smith

    Citation: BMC Evolutionary Biology 2017 17:186

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  15. Content type: Research article

    The distribution of mitochondrial DNA (mtDNA) lineages in Brazil is heterogeneous due to different regional colonization dynamics. Northeastern Brazil, although being an important region in terms of human imig...

    Authors: Ana Paula Schaan, Lorenna Costa, Diego Santos, Antonio Modesto, Marcos Amador, Camile Lopes, Sílvia Helena Rabenhorst, Raquel Montenegro, Bruno D. A. Souza, Thayson Lopes, France Keiko Yoshioka, Giovanny Pinto, Vivian Silbiger and Ândrea Ribeiro-dos-Santos

    Citation: BMC Evolutionary Biology 2017 17:185

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  16. Content type: Research Article

    Circadian clocks are found in organisms of almost all domains including photosynthetic Cyanobacteria, whereby large diversity exists within the protein components involved. In the model cyanobacterium Synechococc...

    Authors: Nicolas M. Schmelling, Robert Lehmann, Paushali Chaudhury, Christian Beck, Sonja-Verena Albers, Ilka M. Axmann and Anika Wiegard

    Citation: BMC Evolutionary Biology 2017 17:169

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  17. Content type: Research Article

    The cytosolic arrestin proteins mediate desensitization of activated G protein-coupled receptors (GPCRs) via competition with G proteins for the active phosphorylated receptors. Arrestins in active, including ...

    Authors: Henrike Indrischek, Sonja J. Prohaska, Vsevolod V. Gurevich, Eugenia V. Gurevich and Peter F. Stadler

    Citation: BMC Evolutionary Biology 2017 17:163

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2016 Journal Metrics

  • Citation Impact
    3.221 - 2-year Impact Factor
    3.628 - 5-year Impact Factor
    1.266 - Source Normalized Impact per Paper (SNIP)
    1.806 - SCImago Journal Rank (SJR)

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