Group | Species | Name | Assembly | Build | Otop1locus | Ush1g-Otop2- Otop3locus |
---|---|---|---|---|---|---|
Placental mammals | Â | Â | Â | Â | Â | Â |
Primate | Humana | Homo sapiens | hg17 | v.35.1 | Chr4:4309000-4438200a | Chr17:70368500-70574600 |
 |  |  |  |  | Chr4:9457200-9718300a |  |
Primate | Chimpanzeea | Pan troglodytes | panTro2 | v.2.1 | Chr4:4274000-4409000a | Chr17:74415000-74633000 |
 |  |  |  |  | Chr4:9519000-9791000a |  |
Primate | Orangutan | Pongo pygmaeus | ponAbe2 | v.2.0.2 | Chr4:9065000-9474000 | Chr17:64862000-65072000 |
Primate | Macaque | Macaca mulatta | rheMac2 | v.1 | Chr5:4455000-4928000 | Chr16:70135000-70333000 |
Primate | Marmoset | Callithrix jacchus | calJac1 | v.2.0.2 | Ctg_6604:8000-119000 | Ctg_751:460000-660000 |
Primate | Galago | Otolemur garnettii | Table 2c | Â | Table 2c | Table 2c |
Rodent | Mouse | Mus musculus | mm9 | v.37 | Chr5:38602000-38894000 | Chr11:115128000-115293000 |
Rodent | Rat | Rattus norvegicus | rn4 | v.3.4 | Chr14:77872000-77739000 | Chr10:105341000-105511000 |
Rodent | Guinea pig | Cavia porcellus | cavPor3 | v.1 | Sc_85:1472000-1733000 | Sc_76:158000-328000 |
Odd-toed ungulate | Horse | Equus caballus | equCab1 | v.1 | Chr3:105657000-106026000 | Chr11:5605000-5775000 |
Even-toed ungulate | Cow | Bos taurus | bosTau4 | v.4.0 | ChrUn.004.380:64500-130400 | Table 2c |
Carnivore | Cat | Felis catus | felCat3 | v.3 | Scaffold_217612:1-354000 | Sc_213691:103000-208000 |
Carnivore | Dog | Canis familiaris | Table 2c | Â | Table 2c | Table 2c |
Insectivore | Hedgehog | Atelerix albiventris | Table 2c | Â | N/Ad | Table 2c |
Dasypodidae | Armadillo | Dasypus novemcinctus | Table 2c | Â | Table 2c | Table 2c |
Non-placental mammals | Â | Â | Â | Â | Â | Â |
Marsupial | Opossum | Monodelphis domestica | monDom4 | v.1 | Chr5:220402000-221007000 | Chr2:214376000-214751000 |
Monotreme | Platypus | Ornithorhynchus anatinus | Table 2c | Â | Table 2c | N/Ad |
Non-mammals | Â | Â | Â | Â | Â | Â |
Bird | Chicken | Gallus gallus | galGal3 | v.2.1 | Chr4:81337000-81509000 | Chr18:10466000-10598000 |
Amphibian | Xenopus | Xenopus tropicalis | xenTro2 | v.4.1 | Sc_441:1-372000 | Table 2c |
Reptile | Lizard | Anolis carolinensis | AnoCar | v.1.0 | Sc_326:248900-318100 | Sc_19:2503800-2589100 |
Teleost fish | Sticklebackb | Gasterosteus aculeatus | gasAcu1 | v.1 | ChrXVII:8677000-8781000 | ChrUn:25945000-25970000b |
 |  |  |  |  |  | ChrXI:8905000-10436000b |
Teleost fish | Zebrafish | Danio rerio | Zv8/danRer6 | Â | Chr14:404900-441700 | Chr3:55047100-55115900 b |
 |  |  |  |  |  | Chr3:58856300-58928900 b |
Teleost fish | Medaka | Oryzias latipes | oryLat2 | v.1.0 | Chr5:15877500-15911600 | Chr8:10213600-10262900 b |
 |  |  |  |  |  | Chr8:11920390-11941600 b |
Teleost fish | Tetraodon | Tetraodon nigroviridis | tetNig2 | v8 | Chr11:1818700-1842400 | Chr3:10856000-10898300 b |
 |  |  |  |  |  | Chr3:9834800-9861700 b |
Teleost fish | Fugu | Takifugu rubripes | JGI 4.0/fr2 | v4.0 | ChrUn:188417600-188434600 | ChrUn:188238700-188275500 b |
 |  |  |  |  |  | ChrUn:273950651-273965439 b |