From: Expansion of the gamma-gliadin gene family in Aegilops and Triticum
Species | Accession | Genome | N seq | N contigs (99%) | Genes | Pseudo-genes | Length (bp) | Genbank accession nr |
---|---|---|---|---|---|---|---|---|
Cloned in this study | Â | Â | Â | Â | Â | Â | Â | Â |
T. monococcum | CGN10542 | Am | 23 | 5 | 4 | 1 | 759-939 | JQ269804-JQ269808 |
Ae. caudata | к2255 | C | 50 | 12 | 9 | 3 | 909-948 | JQ269703-JQ269716 |
Ae. comosa | к2272 | M | 32 | 5 | 3 | 2 | 887-909 | JQ269717-JQ269721 |
Ae. uniaristata | к650 | N | 35 | 7 | 6 | 1 | 873-924 | JQ269742-JQ269750 |
Ae. mutica | к1581 | T | 35 | 8 | 7 | 1 | 882-909 | JQ269722-JQ269729 |
Ae. tauschii | к1368 | D | 32 | 4 | 4 | 0 | 879-897 | JQ269789-JQ269792 |
Ae. umbellulata | к1588 | U | 36 | 10 | 5 | 5 | 873-928 | JQ269730-JQ269741 |
Ae. speltoides | CGN10682 | S | 11 | 3 | 3 | 0 | 648, 909 | JQ269774-JQ269778 |
Ae. speltoides | CGN10684 | S | 81 | 5 | 5 | 0 | 873-1089 | JQ269751-JQ269757 |
Total cloned in this study | Â | Â | 335 | 59 | 46 | 13 | Â | Â |
Already present in Genbank/EMBL/DDBJ (in August 2011) | ||||||||
Ae. searsii | Â | Â | 9 | 3 | 3 | 0 | Â | Â |
Ae. bicornis | Â | Â | 13 | 3 | 3 | 0 | Â | Â |
Ae. longissima | Â | Â | 10 | 4 | 3 | 1 | Â | Â |
Ae. sharonensis | Â | Â | 8 | 5 | 4 | 1 | Â | Â |
Ae. speltoides | Â | Â | 11 | 3 | 3 | 0 | Â | Â |
Ae. tauschii | Â | Â | 10 | 4 | 4 | 0 | Â | Â |
T. monococcum | Â | Â | 30 | 14 | 13 | 1 | Â | Â |
T. urartu | Â | Â | 14 | 5 | 4 | 1 | Â | Â |
Crithopsis delileana | Â | Â | 2 | 2 | 2 | 0 | Â | Â |
Lophopyrum elongatum | Â | Â | 16 | 14 | 8 | 6 | Â | Â |
Dasypyrum sp. | Â | Â | 22 | 11 | 5 | 6 | Â | Â |
Total in Genbank/EMBL/DDBJ | Â | Â | 145 | 68 | 52 | 16 | Â | Â |