Locus | Fw primer | Rv primer | Annealing temp. (°C) | Size1(bp) | Seq. composition (bp)2 | Alleles3 | H 4 |
---|---|---|---|---|---|---|---|
TEF | EF1: ATGGGTAAGGARGACAAGAC | EF2: GGARGTACCAGTSATCATGTT | 53 | 667 | 256 intronic; 411 exonic | 22 | 0.89 |
rDNA | ITS5: GGAAGTAAAAGTCGTAACAAGG | NL4: GGTCCGTGTTTCAAGACGG | 53 | 1029 | 705 coding; 324 ITS | 6 | 0.35 |
RPB2 5-7 | 5f2: GGGGWGAYCAGAAGAAGGC | 7cr: CCCATRGCTTGYTTRCCCAT | 55 | 863 | Exonic | 11 | 0.51 |
RPB2 7-11 | 7cf: ATGGGYAARCAAGCYATGGG | 11ar: GCRTGGATCTTRTCRTCSACC | 55 | 881 | Exonic | - | - |
3968 | 3968fw: TGTTGGTTCGAGATGGTTGA | 3968rv: GAGAAGGGCAACTGGGAGA | 53 | 770 | Intergenic | 12 | 0.68 |
3972 | 3972fw: TCTGATGCAGACTAGCACTCG | 3972rv: ATCGGACGAAACAGAGCAGG | 53 | 831 | Intergenic | 13 | 0.45 |
4081 | 4081fw: TGACRAGGATGAATGAGCGA | 4081rv: TGACCAGCCTCCAAGSG | 56 | 642 | Intergenic | 18 | 0.8 |
6512 | 6512fw: GGAGGACCAGGAGGAATAGG | 6512rv: CAAAGCAGATCGACTGAGGA | 53 | 644 | Intergenic | 12 | 0.52 |
5439 | 5439fw: AATGGGAATACGAGCGTCAG | 5439rv: AGGGGCTGCTGTTAGTGAGA | 53 | 779 | Intergenic | 10 | 0.48 |
5437 | 5437fw: AACAAGACAAGGCAGCAGGT | 5437rv: TCCAGAGGAACGACGAGGC | 56 | 544 | 213 exonic, 331 intergenic | 23 | 0.88 |
MAT1-1 | MAT1-S-1Â F: ATGGCTTTCCGCAGTAAGGA | MAT1-S-1R: CATGATAGGGCAGCAAAGAG | 53 | ~200 | N. A. | N. A. | N. A. |
MAT1-2 | MAT2-S-1Â F: GGGAATCTGAGAAAGATACGTAC | MAT2-S-1R: CGGTACTGGTAGTCGGGAT | 53 | ~800 | N. A. | N. A. | N. A. |