|  | Name | N2/DR1350 | Location | Forward | Reverse | Enzyme |
---|---|---|---|---|---|---|---|
I | 1 | pkP1003 | G/A | 126950 | gtatcctcatccttctaccacc | gcgtcgttccacgtgttatgc | Rsa I |
 | 2 | pkP1098 | C/T | 360847 | tatcatgctggcgtagatttc | tggataaaaagcgtttctgg | Hpa II |
 | 3 | pkP1051 | A/T | 825028 | cctacaacaggcaaagaagc | aattcctaccaaagctccgc | Ssp I |
 | 4 | pkP1102 | C/A | 1517890 | tggaaggatattgtggcg | ctgaacgcgattctcctgtg | Hinf I |
 | 5 | pkP1016 | T/G | 1882334 | gacaatgaccaataagacg | gatccgtgaaattgttccg | Bsr I |
 | 6 | snp_F28H1[1] | C/T | 3989631 | tgccaaaatagcagtaggc | tgaaactgcaataacataacg | Hpy CH4V |
II | 1 | W08F4/33109 | T/C | 593962 | cagacttccaccgtaccattg | gagacgaaacgatttacgagg | Dra I |
 | 2 | pkP2134 | C/T | 862482 | atcaggatccggaacagtcg | tcgtaaatggtcagttttgg | Dde I |
 | 3 | pkP2010 | T/C | 1129821 | taatttctagcaccagtgaggc | cccaaatttccacctgtaatcc | Dde I |
 | 4 | pkP2015 | A/G | 1640462 | gtacctaccgtcattgatagtg | ctttcagtggacagaatccg | Pvu II |
 | 5 | pkP2136 | C/T | 1683953 | agttgtgttatacttgttgg | tgtctaactgaagagatgacg | Xba I |
 | 6 | T05A8/28596 | G/A | 2631509 | ctatggtgcatcgaagtgtc | gtcagcacgttcttaaccttg | Bam HI |
 | 7 | pkP2026 | T/C | 2737466 | cgatggattatgtggtgagtc | caggttggtcatcatttcagac | Sty I |
 | 8 | pkP2114 | C/G | 2755074 | tcacgtcgtcacctacgcc | aatctgaccaaggtatcgg | Alu I |
 | 9 | nP133 | -/TTCCG | 2769667–8 | aacgttcaaaagtgataggtc | ttctcactcggtgtactcgg | Eco RI |
 | 10* | snp_Y25C1A[1] | C/A | 3077209 | accgtctttcagcgctcgacg | caaaattctgctgataatgg | HpyCH 4V |
 | 11 | F19B10/12159 | G/T | 3660181 | ctgcttctctgcaagtctgc | cttggaacagtctctcaacg | Dra II |
 | 12* | snp_C49D10[3] | A/T | 3868386 | agaacatctatcacgacttgg | tttgtgtcatatttgcgtcc | Tsp509 I |
 | 13 | pkP2051 | G/A | 4299265 | gcgtgttttttccgtcgatcg | cagcgtccagactggtttgg | Hae II |
 | 14* | snp_B0304[5] | GG/TT | 4526832–3 | acatcaccaattacacgacc | agatcgtacttattgtagcc | Eco 0109I |
 | 15 | C18A3/8661 | G/A | 5710053 | catgtggacgacgtgtactgg | caatgtgcagtcgtctactgg | Pvu I |
 | 16 | K10B2/5930 | C/T | 6362593 | ccttgtactcgggaacacgc | gaatcagtcaaacgctgcgg | Sfu I |
 | 17 | pkP2109 | C/T | 9401077 | tgaacccataacagcttctgc | aactcgtgcgctctccttgg | Eco RI |
 | 18 | pkP2069 | G/T | 10489659 | tcaaccttcatacgtgtcgc | ggaatgactgataaaggtgtcg | Xba I |
 | 19 | snp_W01G7[1] | G/C | 14044928 | tatataggtacctaaagagc | atttttgtccccttatatgg | Cac 8I |
III | 1 | pkP3002 | A/T | 743326 | ctgcttatagtcttcctgtcg | gcaaccccaccttcaatgac | Ssp I |
 | 2 | snp_Y46E12[4] | T/C | 1765120 | tctaatgttttttccaatcagc | tatgattttactgctgctgg | Ssp I |
 | 3 | pkP3099 | T/C | 5625446 | tctttcagtgggctaacacc | tgcgtgggcagcccaaatacg | Hpy CH4V |
 | 4 | B0361/15143 | A/C | 7279588 | gtatttcttacccgagagtcc | cagttcacctggaatctcaatc | Dde I |
 | 5 | snp_C50C3[2] | G/A | 8180784 | gctcttcttggtacgttccc | cgcgtcttctgagtgtttcc | Alu I |
 | 6 | snp_T05G5[1] | T/A | 9742847 | cgtaaactaccaaactcggtg | ggtctactacaactatacaggc | Dra I |
 | 7 | pkP3059 | A/G | 10613168 | actcggccacgtggcaagc | aaagcctttcggaacttcc | Xba I |
 | 8 | snp_F56A8[1] | C/T | 13247630 | tttggaggaccatcagagg | tggctcaccttctttctcc | Sau 3A |
X | 1 | snp_T23F2[1] | T/A | 5492084 | tttccggcagatgcaccacg | tgcaaatagctgatcactgg | Dde I |
 | 21 | C03B1/38853–6 | TATA/CG | 6374380–3 | cgtagagacgcaaaataggc | gctcaatttcacgcgtccag | Acc I |
 | 31 | C25B8/5416 | C/G | 6374374 | gtatctgagatagggtgcgc | cggaaaacctgttagacatgg | Xba I |
 | 41 | F41C6/10186 | A/G | 6879298 | gtttggtcgctggagttttgg | catcaaagaggcaacaagggg | Fsi I |
 | 52 | pkP6158 | C/T | 8691678 | aagacacccatccatgcatatc | caattgtcagccgttgtttc | Hind III |
 | 62 | pkP6030 | T/G | 8814093 | gtaatcggttactgtgcactg | ctacatcaatgtcaacaccagc | Dde I |
 | 7 | pkP6137 | C/T | 9677614 | gccttggagagtctcgatttg | ttctgaccaccatagccgaac | Hinf I |
 | 8 | pkP6039 | T/C | 10652947 | cctcatctcatctttgcttg | caagatgacttgccgattcatg | Mse I |
 | 9 | snp_F23D12[1] | T/C | 14429597 | taaacagaaaaattcacaaa t/c | atatttgaatggagtttcacc | †|
 | 10 | pkP6167 | C/T | 15106709 | taatagccgccaaagtgcg | gtgaagcaagtttgattttcc | Hinf I |
 | 11 | snp_C02C6[7] | A/G | 15561287 | ttcgcgcatttatcttgtcc | tatattcattgatctaagtgc | Hpy CH4V |
 | 12 | pkP6096 | A/T | 16389174 | gattgaacatagctcacagc | tttcgatcgttttggacgcc | Rsa I |