From: Conflicting phylogenetic signals in the SlX1/Y1 gene in Silene
 | 5' part | 3' part | Entire alignment |
Positions in reduced alignment | 1–1821 | 2385–4045 | 1–4045 |
Corresponding positions in full alignment | 1–2718 | 3927–6416 | 1–6416 |
Number of base/indel characters | 2718/148 | 2490/150 | 6416/361 |
Substitution model | GTR + Γ | GTR + Γ | GTR + Γ |