Table 3 Common orthologous genes identified as positive selected and shared by KT99 and SS9
From: Protein evolution in deep sea bacteria: an analysis of amino acids substitution rates
N° | KT99 Function | Locus Tag | COG | q (%) |
|---|---|---|---|---|
1 | Molybdenum ABC Transporter, Permease Protein | KT99_02056 | 4149P | 10.0 |
2 | Hypothetical Protein | KT99_20194 | - | 0.0 |
3 | Phosphoribosylaminoimidazole Carboxylase, Catalytic Subunit | KT99_17021 | 0041F | 0.0 |
4 | Dithiobiotin Synthetase | KT99_10643 | 0132H | 4.9 |
5 | Uracil Permease | KT99_16519 | 2233F | 0.0 |
6 | TonB2 Protein | KT99_09573 | 0810M | 10.0 |
7 | Primosomal Replication Protein N, Putative | KT99_00710 | - | 7.0 |
8 | Methylated DNA-Protein Cysteine Methyltransferase | KT99_15170 | 0350L | 7.0 |
9 | NADH Dehydrogenase | KT99_13367 | 1252C | 0.0 |
10 | Succinate-Semialdehyde Dehydrogenase | KT99_19874 | 1012C | 0.0 |
11 | MSHA Biogenesis Protein MshL | KT99_07703 | 1450NU | 10.0 |
12 | RND Multidrug Efflux Transporter MexF | KT99_04334 | 0841V | 10.0 |
N° | SS9 Function | Locus Tag | COG | q (%) |
1 | Putative Phosphate ABC Transporter, Permease Protein | PBPRA1392 | 0581P | 4.3 |
2 | Hypothetical Protein | PBPRA2020 | - | 4.8 |
3 | Hypothetical Phosphoribosylaminoimidazole Carboxylase, Catalytic Subunit | PBPRA3574 | 0041F | 0.0 |
4 | Dithiobiotin Synthetase | PBPRA2326 | 0132H | 8.3 |
5 | Putative Xanthine/Uracil Permease | PBPRA0186 | 2233F | 8.3 |
6 | Hypothetical TonB Protein | PBPRA2103 | 0810M | 4.4 |
7 | Hypothetical Primosomal Replication Protein N | PBPRA1010 | - | 8.3 |
8 | Hypothetical Methylated DNA-Protein Cysteine Methyltransferase | PBPRB0210 | 0350L | 4.3 |
9 | Putative Nitrite Reductase (NAD(P)H), Large Subunit | PBPRA1428 | 1251C | 8.3 |
10 | Putative Succinylglutamate 5-Semialdehyde Dehydrogenase | PBPRA0291 | 1012C | 3.3 |
11 | Hypothetical Flp Pilus Assembly Protein | PBPRA2496 | 4964U | 3.3 |
12 | Putative Multidrug Resistance Protein | PBPRA2721 | 0841V | 4.3 |