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Table 2 Frequencies of 12 pseudogenes in 11 cave populations and surface fish

From: The nature and distribution of putative non-functional alleles suggest only two independent events at the origins of Astyanax mexicanus cavefish populations

   

Pseudogenes

 

L

n

Δ-rgr2

Δ-opn8

Ψ-rh1.2

Ψ-cryba2a

Ψ-impg1b

Ψ-prph2b

Ψ-gja8a

Ψ-lim2.1

Ψ-pde6b

Ψ-per2-M

Ψ-per2-T

Ψ-tyrp1a

Jineo

G

6

1.00

      

1.00

 

1.00

  

Molino

G

9

1.00

      

1.00

 

1.00

  

Escondido

G

7

1.00

      

1.00

 

1.00

  

Caballo Moro

G

2

1.00

           

Pachón

A

55

0.95

0.66

0.04

 

0.24

0.15

  

0.76

  

0.69

Sabinos

A

33

0.83

1.00

0.24

0.50

0.53

1.00

0.88

    

1.00

Tinaja

A

16

1.00

0.87

0.44

0.16

0.56

0.94

0.69

   

0.13

0.88

Curva

A

23

1.00

1.00

1.00

 

1.00

1.00

1.00

    

1.00

Toro

A

30

0.75

0.73

 

0.65

0.18

0.75

0.65

    

0.05

Chica

A

33

0.70

0.52

 

0.53

       

0.47

Subterráneo

M

26

            

Surface

 

234

            
  1. L Location, G Sierra de Guatemala, A Sierra de El Abra, M Micos area, n sample size
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BMC Ecology and Evolution

ISSN: 2730-7182

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