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Table 1 Sequences used for analysis

From: Relatedness of baculovirus and gypsy retrotransposon envelope proteins

 

Name/Source

Accession number

LearnCoil-VMF score

Reference

Baculovirus

1.

ld130

af081810

0.57

[32]

2.

se8

af169823

0.56

[8]

3.

xc27

af162221

0.51

[10]

4.

px26

af270937

0.37

[9]

5.

ac23

l22858

0.26* and 0.63

[12]

6.

op21

u75930

0.23

[33]

Dipteran, Retrovirus-like

7.

gypsy Ds

s64735

0.26

[34]

8.

gypsy Dv

s26841

0.47

[35]

9.

gypsy Dm

m12927

0.31

[36]

10.

yoyo

u60529

1.0

[37]

11.

tom

s34640

0

[38]

12.

17.6

x01472

0.44

[39]

13.

297

p20829

0

[40]

14.

idefix

aj009736

0.07

[41]

15.

zam

t13994

0.69* and 0.17

[42]

Lepidopteran, Retrovirus-like

16.

ted

c36329

0.54*

[17]

Drosophila genome

17.

 

cg4715

0

[43]

  1. *Predicted coiled-coil domains are in an upstream location relative to the others.