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Figure 4 | BMC Evolutionary Biology

Figure 4

From: Multiple source genes of HAmo SINE actively expanded and ongoing retroposition in cyprinid genomes relying on its partner LINE

Figure 4

Alignment of HAmo Type II and Type III members. The consensus sequences are shown on top. The most frequently occurring nucleotide at a position was chosen as the consensus nucleotide at the position. The tRNA-derived region and LINE-related region of SINE are shown by thick bar. Star indicates the diagnostic nucleotide between type II and type III. In the central region, type II has two variable polyA insertion in number (3-9, 4-10, respectively). Type III has a TAAATG repeated two times. The GenBank accession numbers of them are as follows: GQ370904-GQ370934.

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