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Table 2 Estimates of substitution rates in Melanohalea from the BEAST analysis of the concatenated six-loci dataset estimated under a relax molecular clock using fixed substitution rates for the nuLSU, mtSSU, and RPB 1 markers [12]

From: Miocene and Pliocene dominated diversification of the lichen-forming fungal genus Melanohalea(Parmeliaceae, Ascomycota) and Pleistocene population expansions

 

Concatenated gene tree analysis

Multilocus species tree analysis

Locus

Rate

Rate 95% HPD

Rate

Rate 95% HPD

ITS

3.296

2.49 – 4.11

3.41

2.67 – 4.17

LSU

0.684

0.58 – 0.80

0.71

0.62 – 0.80

mtSSU

0.701

0.42 – 1.05

0.66

0.44 – 0.92

MCM7

1.649

1.26 – 2.05

1.71

1.36 – 2.08

RPB1

1.548

1.27 – 1.82

1.70

1.57 – 1.83

RPB2

1.391

1.08 – 1.75

1.51

1.20 – 1.82

  1. Units: substitution/site/year X 10-9. HPD: highest posterior density interval.