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Table 4 Predicted calmodulin-binding sites in Arabidopsis and rice IQD proteins

From: Genome-wide comparative analysis of the IQD gene families in Arabidopsis thaliana and Oryza sativa

Groupa Gene Identifier Protein Predicted calmodulin binding sequenceb
Ia At1g51960 IQD27 (98) EERWAAVKIQKVFRG SL (114)
  At3g16490 IQD26 (137) ALVRGYLVRKRAA ET (151)
  At4g29150 IQD25 (65) KERRTHAIAVA (75) (83) DAAVAAAKAAAA (94)
  At5g07240 IQD24 (105) EYKAAMKIQSAFRGYL A (121)
  At5g62070 IQD23 (115) QENIAAMKIQSAFRGY LAR (133)
  At4g23060 IQD22 (189) LKGLVRLQAIVRGHIER K (205)
Ib At3g49260 IQD21 (137) RALRALK GL (145)
  At3g51380 IQD20 (9) VVRRKLLRRSQ SR (22)
  At4g14750 IQD19 (155) ALITLQAKAREQRIR MIG (172)
Ic At3g49380 IQD15 (140) ALVRGHNVRRRTSITLQRVQAL VRI (164)
  At4g10640 IQD16 (235) EIAIKREKAQALALSN QI (252)
  At1g01110 IQD18 (146) LVKLQALVRGHNVR KQ (161)
  At4g00820 IQD17 (157) LVKLQALVRGHNVR KQA (172)
II At2g43680 IQD14 (1) MVKKGSWFSAI (11)
  At3g59690 IQD13 (1) MGKKGSWFSAI (11)
  At5g03960 IQD12 (8) FGWMKRLFICEAKA RAEK (24)
  At5g13460 IQD11 (5) KGLFTVLKRIFISEVN (20)
IIIa At1g17480 IQD7 (125) IFRGRQVRKQA AVTLRC (141)
  At1g72670 IQD8 (119) VRIQAIFRGRQ VRK (132)
  At2g26180 IQD6 (116)VRGRQVRKQAAVTLRCMQALVRVQAR VRARR (146)
  At3g22190 IQD5 (137) QALVRVQARVRAR RV (151)
  At2g33990 IQD9 (59) AYKARKSLRRLKGI ARAKLS (78)
  At3g15050 IQD10 (61) RAFKARK RLCS (71)
IIIb At3g09710 IQD1 (103) GKSKEEAAA IL (113)
  At5g03040 IQD2 (141) VRLKLLMEGSVVKQ AAN (158)
  At3g52290 IQD3 (213) MLNKQVATMRREKALAYA F (231)
  At2g26410 IQD4 (245) RSVNRKEASVRRERAL AY (262)
IV At1g14380 IQD28 (106) AHQARRAF RTL (116)
  At2g02790 IQD29 (159) VKVQALVRGKKA RSS (173)
  At1g74690 IQD31 (149) LVRRQAVATLF (160)
  At1g18840 IQD30 (159) GIVRLQALARGREIRHSDIG (178)
  At1g19870 IQD32 (230) ARRELLRSK KVI (241)
  At5g35670 IQD33 (270) RERALAYA FSQQL (282)
I Os01m00895 OsIQD22 (134) PRGRAAAVKIQTAFRGF L (151)
  Os05m00863 OsIQD21 (434) NRVQEAFNFKTAVVGRL DR (453)
  Os01m05259 OsIQD20 (94) MVIQKAYRG YLA (105)
  Os05m04170 OsIQD19 (87) AVMIQKAFRGYLARRALRA (107) (110) LKALVKIQALVRGYLVRKQAATT (129)
  Os10m02409 OsIQD18 (48) KKRWSFRRS SASASAAAM (65) (170) TLRRMQALLVAQARlRA Q (187)
  Os03m00584 OsIQD17 (28) ALPGEAAKEKRWSFRRPVHG (47)
  Os03m04199 OsIQD16 (138) KLQALVRGHLVRRQA S (153)
  Os04m04664 OsIQD15 (121) KREEYAAVRIQAA FRG (136)
  Os08m00125 OsIQD14 (269) TRKDAALKRERALS YA (284)
  Os02m01875 OsIQD13 (127) ASREERAA VRIQ (138)
  Os06m02303 OsIQD12 (120) AGREERAA VRIQA (132)
II Os01m06663 OsIQD11 (1) MGKKGGWITA (11)
IIIa Os05m04352 OsIQD10 (114) RLVRRQLAVTLKCMNA LLR (132)
  Os01m04963 OsIQD9 (120) RGRRVRKQL AVTLKCMQALV (139)
  Os01m00929 OsIQD5 (143) QVRKQAAVTLRCMQALVRVQARIRARR VRMST (176)
  Os12m04168 OsIQD8 (147) AQARVRARRVR ISL (160)
  Os03m04309 OsIQD3 (161) ARVRARQVRVS LE (173)
  Os03m05627 OsIQD4 (113) FLARRARR ALKGL (125)
  Os06m00539 OsIQD7 (174) VKRERAMAYAFNHQWRA R (191)
IIIb Os05m00240 OsIQD1 (219) AVRRERALAYAFSHQW K (235)
  Os01m06082 OsIQD2 (1) MGKKGNWFSAV (11)
  Os05m03604 OsIQD6 (132) RVYLGRRSQRARG LDRL (148)
IV Os05m04307 OsIQD23 (160) WLIVKFQALVRGRN VR (174)
  Os01m05025 OsIQD24 (155) LVRGRNVRLS GASI (168)
  Os04m05532 OsIQD25 (295) LVRRQAA ESLQ (305)
  Os03m00334 OsIQD26 (154) GNAKLGRR (161)
  Os04m04570 OsIQD27 (8) LEKKRVITVQGRDKAGRP I (26) (132) GKLRYVSRLEYLWAHVRK G (150)
  Os06m03925 OsIQD28 (252) LAYAFSQQLRSCGGGGGGTT (271)
  1. a Roman numerals correspond to subfamilies and subgroups of IQD proteins as used in Figure 1 and Figure 3.
  2. b Putative calmodulin-binding sites predicted by the Calmodulin Target Database [40] are shown for strings of amino acid residues with a score of at least "7". Residues with the highest score ("9") are highlighted in bold.