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Table 1 Location of repeats in the grape chloroplast genome. Repeats 1 to 15 are direct, and 16 to 36 are inverted. Table includes repeats at least 30 bp in size, with a sequence identity ≥ 90%. IGS = Intergenic spacer. See Figure 1 for location of repeats on the gene map. Repeats indicated by * (palindrome) and ** (tandem) are only shown once on the circular map in Figure 1.

From: Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids

Repeat Number Size (bp) Location
1 30* IGS
2 30 ycf3 intron, IGS
3 31 IGS
4 31 TrnG-GCC
5 32 IGS (4 bp) – trnS-GCU, IGS (4 bp) – trnS-UGA
6 34** ycf2
7 39 ycf3 intron, IGS, ndhA intron
8 40 IGS
9 41 psaB exon – psaA exon
10 42 IGS, ndhA intron
11 46** ycf2
12 46** ycf2
13 52** ycf2
14 64** ycf2
15 64** ycf2
16 30 IGS (3 bp) – trnS-GCU, trnS-GGA
17 30* IGS
18 30 IGS (2 bp) – trnS-UGA, trnS-GGA
19 30 ycf3 intron, IGS
20 31 IGS
21 33* IGS
22 34 ycf2
23 34 ycf2
24 34* ycf1
25 36* IGS, ycf1
26 39 ycf3, IGS
27 40 IGS
28 42 ndhA intron, IGS
29 43* IGS
30 46 Ycf2
31 46 Ycf2
32 52 Ycf2
33 52 Ycf2
34 54* IGS
35 64 Ycf2
36 64 Ycf2