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Table 2 MCOX2e amino acid sites that may be under positive selection.

From: Extreme primary and secondary protein structure variability in the chimeric male-transmitted cytochrome coxidase subunit II protein in freshwater mussels: Evidence for an elevated amino acid substitution rate in the face of domain-specific purifying selection

Site Bayes factor (HyPhy) Posterior probability (codeml)
62 39.618 --------
67 -------- 0.589
77 70.465 --------
78 -------- 0.743
82 31.017 --------
85 -------- 0.801
107 29.190 --------
112 35.985 --------
122 -------- 0.521
124 28.480 --------
128 -------- 0.607
135 28.515 --------
140 24.688 --------
152 -------- 0.904
  1. Bayes factors for the eight sites potentially inferred to be under positive selection by HyPhy and posterior probabilities for the six sites potentially inferred to be under positive selection by the codeml algorithm in PAML. Site numbers correspond to those in Additional file 1.