From: Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus
Base position | P | aA | ω value | S.E. | P(ω > 1) | Exon | Bases | SNP alleles and amino acids |
---|---|---|---|---|---|---|---|---|
4429–31 | 3 | T | 9.983 | 0.878 | 0.998 | 1 | ACA | V, F: CCA (P); B: GCA (A) |
4435–37 | 5 | F | 10.002 | 0.772 | 1.000 | 1 | TTT | Chicken, C: CTT (L); R, V, F: TTC (F); B TTG (F) |
4477–79 | 19 | L | 9.996 | 0.807 | 0.999 | 1 | CTG | V, F: CGC (R); B: CCA (P) |
7453–56 | 23 | V | 9.951 | 1.029 | 0.995 | 2 | GTT | V, F: TTT (F); B: CTT (L) |
7534–36 | 50 | E | 10.003 | 0.77 | 1.000 | 2 | GAA | V, F: CCA (P); B: CGA (R) |
7582–84 | 66 | L | 10.000 | 0.786 | 1.000 | 2 | CTT | V, F: TTT (F); B: AAT (N) |
7594–5, 8394 | 70 | R | 9.984 | 0.871 | 0.998 | 2, 3 | AGA | V: TCA (S); F: ATA (M) |
9583–85 | 125 | T | 9.999 | 0.788 | 1.000 | 4 | ACT | C, B: GCT (A); V, F: TCT (S) |
9631–33 | 141 | L | 9.771 | 1.636 | 0.976 | 4 | TTG | C, G, B: CTG (L); V, F: ATG (M) |
9646–48 | 146 | S | 9.995 | 0.811 | 0.999 | 4 | AGC | V, F: CGC (R); B: GGC (G) |
9715–17 | 169 | Q | 9.972 | 0.933 | 0.997 | 4 | CAA | V, F: CGC (R); B: CCC (P) |
9721–23 | 171 | E | 9.970 | 0.942 | 0.997 | 4 | GAA | V, F: GCA (A); B: GGA (G) |
12367–69 | 418 | M | 9.661 | 1.904 | 0.964 | 9 | ATG | V: CTG (L); B: GTG (V); F: TTG (L) |
12628–30 | 509 | A | 9.895 | 1.253 | 0.989 | 9 | GCA | V, F: GTA (V) |
12631–33 | 510 | R | 9.966 | 0.963 | 0.996 | 9 | AGA | V: AGT (S); B: AGG (R); F: AGC (S) |
12652–54 | 517 | H | 9.995 | 0.811 | 0.999 | 9 | CAC | Chicken, R: CAT (H); RJF, F, V: CAA (Q); B: AAC (N) |
12661–63^ | 520 | P | 9.110 | 2.54 | 0.930 | 9 | CCT | Chicken, R, RJF: CTT (L) |
12742–44 * | 547 | I | 9.619 | 2.097 | 0.954 | 9 | ATA | R, C: TTA (L) |
12823–25 | 574 | H | 9.941 | 1.07 | 0.994 | 9 | CAT | V, F: CAC (H); B, F: CAT (H) |
12844–46 | 581 | V | 9.976 | 0.914 | 0.997 | 9 | GTG | V, F: ATG (M); B: CTG (L) |
12871–73 | 590 | G | 9.580 | 2.076 | 0.956 | 9 | GGC | Chicken, RJF, B, F, V: AGC (S) |
12955–57 * | 618 | E | 9.622 | 2.092 | 0.955 | 9 | GAG | V, F, B: GCG (A) |
12979–81 | 626 | S | 9.579 | 2.078 | 0.956 | 9 | AGC | V: CGC (R); F: GGC (G) |
12985–87 | 628 | E | 9.934 | 1.101 | 0.993 | 9 | GAA | Chicken: GAG (E); RJF, R, G, C: GAC (D) |
13042–44 | 647 | A | 9.661 | 1.902 | 0.964 | 9 | GCC | V, B, F: GTC (V) |
13078–80 | 659 | N | 9.727 | 1.746 | 0.971 | 9 | AAT | V, F: AAA (K); B: AAC (N) |
13096–98 | 665 | R | 9.981 | 0.889 | 0.998 | 9 | CGA | Chicken: CAA (Q), TGA (stop); R, G, C: AGA (R): RJF, F: ATA (M); V: ACA (T); B: AAA (K) |
13123–25 | 674 | S | 9.950 | 1.033 | 0.994 | 9 | TCT | V: TGT (C); B: TTT (F); F: TAT (Y) |
13138–40 | 679 | A | 9.994 | 0.82 | 0.999 | 9 | GCA | V: GGC (G); B: GTG (V); F: GGT (G) |