Skip to main content

Advertisement

Table 2 Functional classificationa of protein familiesb bearing indels conserved across members of nematodes

From: Systematic analysis of insertions and deletions specific to nematode proteins and their proposed functional and evolutionary relevance

  Free-Living Plant-parasitic Animal-parasitic P-value
  (227 families) (82 families) (53 families) (Exact test)
Electron transport 1.30% 6.00% 0% 0.04
Signal transduction 9.30% 8.50% 3.80% 0.51
Carbohydrate metabolism 3.50% 8.50% 3.80% 0.21
Lipid, fatty acid, and steroid metabolism 6.60% 15.90% 5.60% 0.04
Proteolysis 7.00% 10.00% 3.80% 0.46
Protein modification 7.50% 8.50% 7.60% 0.96
Nucleoside, nucleotide, and nucleic acid metabolism 28.20% 28.00% 34.00% 0.58
Intercellular protein traffic 8.80% 6% 3.80% 0.48
Cell cycle 11% 8.50% 17.00% 0.31
Transport 4.40% 4.80% 3.80% 1.00
  1. a, Functional classification is based on the Panter protein classification system [92];
  2. b, Only proteins families with indels common to a nematode group are included.