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Fig. 4 | BMC Evolutionary Biology

Fig. 4

From: UDP-glycosyltransferase genes in trypanosomatid genomes have diversified independently to meet the distinct developmental needs of parasite adaptations

Fig. 4

Consensus maximum likelihood phylogeny of UDP-glycosyltransferases nucleotide sequences from African trypanosomes. The phylogeny was estimated with PHYML a GTR+Γ model and 500 bootstrap replicates. Terminal nodes are named with Genedb [47] and Tritrypdb [46] identifiers internal nodes are labeled with bootstrap percentages for maximum likelihood (ML), posterior probabilities (BI), and logdet (NJ) methods for nucleotides sequences and with bootstrap percentages for ML (PhyML [51]), posterior probabilities (BI), and bootstrap percentages for ML (IQTree [53]) for protein sequences. Dashes represent differences in topology. The tree is rooted with Bodo saltans as outgroup. Tips are labeled according to key. Available expression data is represented as log2 fold change as procyclic (PF), constitutive (C), or bloodstream form (BF) in a heat map according to study reference. Asterisk indicates data is transcriptomic

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