Table 4 Automatic subfamily assignment by aminoacidic motif search
From: Defining novel plant polyamine oxidase subfamilies through molecular modeling and sequence analysis
ID | Organism | Assignation by phylogeny | Assignation by motif search |
|---|---|---|---|
U5G093 | P. trichocarpa | Subfamily 1 | Subfamily 1 |
A0A078CR66 | B. napus | Subfamily 1 | Subfamily 1 |
M0XC59 | H. vulgare | Subfamily 2 | Subfamily 2 |
B8BGH2 | O. sativa | Subfamily 2 | Subfamily 2 |
R0F4R6 | C. rubella | Subfamily 3 | Subfamily 3 |
A0A087GI24 | A. alpina | Subfamily 3 | Subfamily 3 |
C5XI79 | S. bicolor | Subfamily 3 | Subfamily 3 |
A0A0D9V4T9 | L. perrieri | Subfamily 3 | Subfamily 3 |
R0FMX3 | C. rubella | Subfamily 4 | Subfamily 4 |
I1J381 | B. distachyon | Subfamily 4 | Subfamily 4 |
Lus10020726 | L. usitatissimum | Not Included | No Hit |
Lus10005021 | L. usitatissimum | Not Included | Subfamily 4 |
Lus10039599 | L. usitatissimum | Not Included | No Hit |
Lus10019725 | L. usitatissimum | Not Included | No Hit |
Gh_A05G0221 | G. hirsutum | Not Included | Subfamily 3 |
Gh_A07G0104 | G. hirsutum | Not Included | Subfamily 3 |
Gh_A08G0331 | G. hirsutum | Not Included | Subfamily 4 |
Gh_A08G0507 | G. hirsutum | Not Included | Subfamily 1 |
Gh_A12G2582 | G. hirsutum | Not Included | Subfamily 4 |
Gh_D05G0300 | G. hirsutum | Not Included | Subfamily 3 |
Gh_D07G2378 | G. hirsutum | Not Included | Subfamily 3 |
Gh_D08G0428 | G. hirsutum | Not Included | Subfamily 4 |
Q0J290 | O. sativa | Not Included | Subfamily 2 |
Cs4g14150.1 | C. cinnensis | Not Included | Subfamily 3 |