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Table 2 Summary of sequence variation across loci/amplicons

From: Immunogenetic response of the bananaquit in the face of malarial parasites

 

# Alleles

Length

# Polymorphisms

# Polymorphisms / Length

Ï€

TLR1A

7

363

5

0.014

0.006

TLR2B

14

384

16

0.042

0.013

TLR7

7

372

8

0.022

0.008

MHC1-UAA-1

3

371

2

0.005

0.004

MHC1-UAA-2

4

364

4

0.011

0.006

Mean over loci

7

371

7

0.019

0.007

St. Dev. over loci

4

8

5

0.014

0.004

Range over loci

3–14

363–384

2–16

0.005–0.042

0.004–0.013

  1. Presumptive alleles detected at each locus/amplicon and their overall genetic variation. π = nucleotide diversity (average pairwise differentiation between unique allele sequences)