Table 2 Recovery statistics for HybPiper, SECAPR, and Captus
From: Resolving the phylogeny of Thladiantha (Cucurbitaceae) with three different target capture pipelines
Pipeline | No. of genes | Average length of alignments | No. of nucleotides | No. of informative sites |
|---|---|---|---|---|
HybPiper-BLASTx | 1,178 | 2,487 | 2,929,586 | 216,707 |
HybPiper-DIAMOND | 1,178 | 2,483 | 2,925,302 | 216,213 |
SECAPR | 1,180 | 1,543 | 1,821,303 | 241,889 |
Captus | 1,180 | 2,883 | 3,402,068 | 300,122 |