Estimates |
Θ
C
|
Θ
J
|
Θ
A
|
m
C-J
|
m
J-C
|
t
|
N
C
|
N
J
|
N
A
| 2NCMC-J | 2NJMJ-C | T(years BP) |
---|
MLE | 106.596 | 56.652 | 25.730 | 0.005 | 0.005 | 5.150 | 113047 | 60080 | 27287 | 0.00005 | 0.00003 | 889,358 |
HPD90Lo | 55.136 | 29.992 | 11.027 | 0.005 | 0.005 | 2.950 | 58472 | 31807 | 11694 | 0.00003 | 0.00002 | 509,438 |
HPD90Hi | 231.570 | 109.971 | 69.839 | 0.085 | 0.085 | 6.910 | 245584 | 116626 | 74065 | 0.00010 | 0.00005 | 1193,295 |
- Population rate parameters ΘC, ΘJ, and ΘA refer to the scaled effective population sizes (Ne) of var. sinensis (East China), var. arguta (South Japan), and the ancestral population, respectively. mC-J and mJ-C are the scaled migration rates forward in time from var. sinensis to var. arguta and vice versa. MC-J and MJ-C are the probabilities of migration from var. sinensis to var. arguta, per gene copy per generation and vice versa. 2NCMC-J and 2NJMJ-C are the effective migration rates (number of migrants per generation). t is the time since ancestral population splitting in mutational units.
- All estimates include the per gene mutation rate u, which is equal to the geometric mean of the mutation rates of all the loci. ΘC, ΘJ, ΘA, mC-J, mJ-C, and t are scaled by the mutation rate, while NC, NJ, NA, 2NCMC-J, 2NJMJ-C and T are scaled by individuals or years.